STRINGSTRING
JNHE01000004_gene1572 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000004_gene1572" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000004_gene1572annotation not available (291 aa)    
Predicted Functional Partners:
JNHE01000019_gene4091
annotation not available (320 aa)
       
  0.770
JNHE01000004_gene1571
annotation not available (251 aa)
 
     
  0.769
JNHE01000046_gene3797
annotation not available (336 aa)
   
 
  0.766
JNHE01000008_gene3752
annotation not available (238 aa)
 
 
  0.731
JNHE01000027_gene3036
annotation not available (356 aa)
   
 
  0.719
JNHE01000006_gene1203
annotation not available (775 aa)
     
      0.687
JNHE01000004_gene1566
annotation not available (291 aa)
 
   
  0.675
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (510 aa)
       
 
  0.675
JNHE01000004_gene1649
annotation not available (479 aa)
       
  0.663
JNHE01000012_gene1413
annotation not available (259 aa)
       
  0.628
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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