STRINGSTRING
JNHE01000004_gene1579 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000004_gene1579" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000004_gene1579annotation not available (126 aa)    
Predicted Functional Partners:
JNHE01000019_gene4123
annotation not available (123 aa)
   
          0.768
JNHE01000005_gene997
annotation not available (341 aa)
   
     
  0.712
JNHE01000009_gene3342
annotation not available (196 aa)
   
          0.703
JNHE01000019_gene4147
annotation not available (164 aa)
   
        0.664
JNHE01000009_gene3259
annotation not available (58 aa)
   
          0.659
JNHE01000035_gene4256
annotation not available (97 aa)
   
          0.639
JNHE01000014_gene2902
annotation not available (297 aa)
   
          0.628
JNHE01000021_gene4083
annotation not available (194 aa)
   
          0.613
JNHE01000037_gene4289
annotation not available (324 aa)
   
          0.607
JNHE01000012_gene1368
annotation not available (94 aa)
   
          0.577
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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