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JNHE01000004_gene1580 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000004_gene1580" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000004_gene1580annotation not available (475 aa)    
Predicted Functional Partners:
JNHE01000032_gene891
Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (163 aa)
       
      0.759
JNHE01000004_gene1750
annotation not available (139 aa)
     
 
  0.707
JNHE01000004_gene1647
annotation not available (569 aa)
     
 
  0.677
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (150 aa)
       
 
  0.644
JNHE01000027_gene3051
annotation not available (1210 aa)
         
  0.619
JNHE01000004_gene1581
annotation not available (252 aa)
              0.607
JNHE01000027_gene3050
annotation not available (1138 aa)
   
     
  0.592
recF
DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (367 aa)
     
   
  0.560
JNHE01000027_gene3052
annotation not available (666 aa)
       
 
  0.547
rdgC
Recombination-associated protein RdgC; May be involved in recombination (312 aa)
   
     
  0.545
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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