STRINGSTRING
JNHE01000004_gene1605 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000004_gene1605" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000004_gene1605annotation not available (853 aa)    
Predicted Functional Partners:
JNHE01000014_gene2909
annotation not available (1663 aa)
     
  0.945
JNHE01000012_gene1472
annotation not available (575 aa)
 
  0.924
JNHE01000004_gene1606
annotation not available (49 aa)
 
          0.913
JNHE01000004_gene1607
annotation not available (113 aa)
 
   
  0.906
JNHE01000012_gene1413
annotation not available (259 aa)
   
 
  0.865
JNHE01000021_gene4088
annotation not available (1167 aa)
     
  0.846
JNHE01000006_gene1030
annotation not available (528 aa)
   
  0.844
JNHE01000033_gene940
annotation not available (635 aa)
     
  0.807
JNHE01000034_gene4191
annotation not available (263 aa)
     
  0.804
JNHE01000006_gene1128
annotation not available (155 aa)
 
   
  0.794
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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