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JNHE01000004_gene1620 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000004_gene1620" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000004_gene1620annotation not available (333 aa)    
Predicted Functional Partners:
JNHE01000004_gene1619
annotation not available (1024 aa)
 
  0.991
JNHE01000011_gene3700
annotation not available (105 aa)
 
  0.848
JNHE01000002_gene2076
annotation not available (1059 aa)
 
  0.839
JNHE01000009_gene3403
annotation not available (408 aa)
  0.827
JNHE01000001_gene508
annotation not available (1019 aa)
  0.819
JNHE01000012_gene1477
annotation not available (1023 aa)
  0.818
JNHE01000076_gene3130
annotation not available (545 aa)
 
  0.811
JNHE01000012_gene1476
annotation not available (1030 aa)
  0.809
JNHE01000032_gene902
annotation not available (421 aa)
   
  0.797
JNHE01000010_gene3479
annotation not available (1050 aa)
  0.785
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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