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JNHE01000004_gene1623 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000004_gene1623" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000004_gene1623annotation not available (255 aa)    
Predicted Functional Partners:
JNHE01000033_gene940
annotation not available (635 aa)
 
       
  0.904
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (953 aa)
       
    0.674
JNHE01000018_gene3919
annotation not available (380 aa)
 
 
 
  0.655
rsmJ
Ribosomal RNA small subunit methyltransferase J; Specifically methylates the guanosine in position 1516 of 16S rRNA (259 aa)
              0.605
JNHE01000030_gene648
annotation not available (236 aa)
   
          0.584
JNHE01000004_gene1744
annotation not available (253 aa)
   
          0.580
JNHE01000002_gene2335
annotation not available (171 aa)
   
          0.560
JNHE01000004_gene1761
annotation not available (246 aa)
   
          0.544
JNHE01000032_gene904
annotation not available (191 aa)
   
        0.543
JNHE01000030_gene613
annotation not available (308 aa)
   
        0.543
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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