STRINGSTRING
JNHE01000004_gene1638 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000004_gene1638" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000004_gene1638annotation not available (429 aa)    
Predicted Functional Partners:
JNHE01000004_gene1639
annotation not available (183 aa)
              0.882
JNHE01000004_gene1640
annotation not available (234 aa)
              0.780
JNHE01000004_gene1637
annotation not available (219 aa)
              0.707
JNHE01000004_gene1635
annotation not available (297 aa)
   
        0.666
JNHE01000004_gene1634
annotation not available (107 aa)
 
          0.665
JNHE01000004_gene1636
annotation not available (248 aa)
   
        0.614
JNHE01000025_gene2856
annotation not available (302 aa)
   
          0.517
JNHE01000037_gene4280
annotation not available (546 aa)
   
          0.480
JNHE01000006_gene1030
annotation not available (528 aa)
   
          0.474
JNHE01000033_gene959
annotation not available (269 aa)
   
          0.473
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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