STRINGSTRING
JNHE01000004_gene1710 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000004_gene1710" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000004_gene1710annotation not available (280 aa)    
Predicted Functional Partners:
JNHE01000004_gene1711
annotation not available (423 aa)
 
     
  0.679
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (953 aa)
       
    0.674
JNHE01000004_gene1709
annotation not available (254 aa)
              0.618
JNHE01000004_gene1708
annotation not available (425 aa)
              0.614
JNHE01000004_gene1707
annotation not available (159 aa)
              0.614
JNHE01000032_gene904
annotation not available (191 aa)
 
        0.611
JNHE01000020_gene3954
annotation not available (294 aa)
   
          0.597
JNHE01000030_gene613
annotation not available (308 aa)
   
        0.543
JNHE01000036_gene4326
annotation not available (233 aa)
     
      0.522
JNHE01000001_gene569
annotation not available (249 aa)
     
      0.522
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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