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JNHE01000004_gene1724 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000004_gene1724" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000004_gene1724annotation not available (213 aa)    
Predicted Functional Partners:
JNHE01000004_gene1723
annotation not available (330 aa)
   
        0.891
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin); Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate; Belongs to the IspG family (370 aa)
   
        0.885
JNHE01000006_gene1035
annotation not available (206 aa)
 
     
  0.815
JNHE01000006_gene1036
annotation not available (190 aa)
   
     
  0.788
JNHE01000006_gene1155
annotation not available (2436 aa)
 
   
    0.763
JNHE01000006_gene1033
annotation not available (692 aa)
   
   
  0.742
rlmN
Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (382 aa)
   
        0.691
JNHE01000004_gene1720
annotation not available (212 aa)
 
        0.641
JNHE01000041_gene3164
annotation not available (344 aa)
   
     
  0.633
hisS
annotation not available (419 aa)
   
        0.625
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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