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JNHE01000004_gene1735 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000004_gene1735" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000004_gene1735annotation not available (261 aa)    
Predicted Functional Partners:
JNHE01000018_gene3865
annotation not available (323 aa)
 
  0.990
JNHE01000018_gene3926
annotation not available (301 aa)
 
  0.988
trmJ
tRNA (cytidine/uridine-2’-O-)-methyltransferase TrmJ; Catalyzes the formation of 2’O-methylated cytidine (Cm32) or 2’O-methylated uridine (Um32) at position 32 in tRNA (232 aa)
   
   
  0.913
JNHE01000014_gene2899
annotation not available (250 aa)
   
   
  0.899
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide (403 aa)
 
   
  0.894
JNHE01000004_gene1661
annotation not available (434 aa)
 
 
  0.884
JNHE01000064_gene114
annotation not available (462 aa)
     
 
  0.867
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate; Belongs to the TrpA family (269 aa)
     
 
  0.850
JNHE01000025_gene2854
annotation not available (404 aa)
     
 
  0.849
JNHE01000007_gene1277
annotation not available (562 aa)
       
    0.845
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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