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JNHE01000004_gene1748 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000004_gene1748" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000004_gene1748annotation not available (364 aa)    
Predicted Functional Partners:
JNHE01000004_gene1747
annotation not available (354 aa)
 
  0.999
JNHE01000001_gene253
annotation not available (241 aa)
 
  0.994
JNHE01000026_gene3091
annotation not available (922 aa)
 
  0.915
lptA
Lipopolysaccharide export system protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm (164 aa)
 
 
  0.820
JNHE01000007_gene1306
Heme exporter protein B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes (223 aa)
     
 
    0.679
pepA
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides; Belongs to the peptidase M17 family (495 aa)
   
        0.678
JNHE01000004_gene1750
annotation not available (139 aa)
 
          0.667
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide (403 aa)
       
  0.654
JNHE01000030_gene619
annotation not available (222 aa)
     
 
    0.637
JNHE01000001_gene255
annotation not available (188 aa)
 
 
  0.600
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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