STRINGSTRING
JNHE01000006_gene1015 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000006_gene1015" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000006_gene1015annotation not available (596 aa)    
Predicted Functional Partners:
JNHE01000006_gene1016
annotation not available (144 aa)
              0.678
JNHE01000006_gene1013
annotation not available (1116 aa)
 
          0.613
cysC
Multifunctional fusion protein; Catalyzes the synthesis of activated sulfate; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily (625 aa)
       
  0.504
JNHE01000002_gene2313
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (507 aa)
     
 
  0.484
JNHE01000006_gene1014
annotation not available (487 aa)
              0.484
JNHE01000006_gene1017
annotation not available (147 aa)
              0.462
gpsA
annotation not available (340 aa)
   
        0.441
JNHE01000006_gene1012
annotation not available (594 aa)
         
  0.411
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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