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JNHE01000006_gene1029 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000006_gene1029" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000006_gene1029annotation not available (1441 aa)    
Predicted Functional Partners:
JNHE01000006_gene1028
annotation not available (472 aa)
  0.999
JNHE01000031_gene692
annotation not available (370 aa)
   
  0.994
JNHE01000018_gene3889
annotation not available (445 aa)
   
  0.994
JNHE01000002_gene2301
annotation not available (340 aa)
   
  0.994
JNHE01000019_gene4172
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (107 aa)
   
  0.994
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (359 aa)
 
 
  0.992
JNHE01000015_gene4401
annotation not available (112 aa)
 
 
  0.984
JNHE01000003_gene1914
annotation not available (536 aa)
     
0.984
JNHE01000002_gene2368
annotation not available (441 aa)
     
0.984
JNHE01000041_gene3155
annotation not available (456 aa)
   
 
  0.978
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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