STRINGSTRING
JNHE01000006_gene1053 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000006_gene1053" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000006_gene1053annotation not available (519 aa)    
Predicted Functional Partners:
JNHE01000002_gene2095
annotation not available (1236 aa)
       
  0.728
JNHE01000003_gene2060
annotation not available (251 aa)
     
        0.721
JNHE01000006_gene1052
annotation not available (229 aa)
 
          0.653
JNHE01000006_gene1054
annotation not available (204 aa)
         
  0.606
JNHE01000010_gene3523
annotation not available (583 aa)
   
 
  0.577
JNHE01000001_gene176
annotation not available (575 aa)
     
 
  0.556
JNHE01000039_gene65
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (969 aa)
   
  0.524
JNHE01000001_gene207
annotation not available (389 aa)
 
     
  0.523
JNHE01000001_gene431
annotation not available (399 aa)
 
     
  0.502
JNHE01000047_gene1546
annotation not available (152 aa)
   
   
  0.441
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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