STRINGSTRING
JNHE01000006_gene1089 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000006_gene1089" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000006_gene1089annotation not available (176 aa)    
Predicted Functional Partners:
JNHE01000006_gene1088
annotation not available (325 aa)
 
   
  0.936
JNHE01000006_gene1090
annotation not available (686 aa)
 
        0.919
JNHE01000006_gene1091
annotation not available (653 aa)
 
          0.896
JNHE01000006_gene1093
annotation not available (257 aa)
 
          0.877
JNHE01000006_gene1092
annotation not available (409 aa)
 
          0.874
JNHE01000041_gene3150
annotation not available (367 aa)
 
     
  0.779
JNHE01000038_gene6
annotation not available (209 aa)
 
          0.770
JNHE01000041_gene3151
annotation not available (430 aa)
 
        0.757
JNHE01000006_gene1095
annotation not available (364 aa)
 
          0.755
JNHE01000038_gene5
annotation not available (1007 aa)
 
          0.727
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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