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JNHE01000006_gene1116 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000006_gene1116" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000006_gene1116annotation not available (727 aa)    
Predicted Functional Partners:
JNHE01000006_gene1117
annotation not available (607 aa)
   
      0.774
JNHE01000006_gene1115
annotation not available (179 aa)
   
        0.559
JNHE01000021_gene4026
annotation not available (349 aa)
 
  0.481
JNHE01000004_gene1580
annotation not available (475 aa)
   
        0.461
JNHE01000023_gene2566
annotation not available (651 aa)
   
        0.460
JNHE01000017_gene4588
annotation not available (164 aa)
   
        0.443
JNHE01000006_gene1114
annotation not available (233 aa)
              0.433
JNHE01000006_gene1113
annotation not available (227 aa)
              0.433
JNHE01000013_gene2796
annotation not available (216 aa)
   
        0.431
JNHE01000033_gene962
annotation not available (380 aa)
     
        0.420
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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