STRINGSTRING
JNHE01000006_gene1131 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000006_gene1131" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000006_gene1131annotation not available (98 aa)    
Predicted Functional Partners:
JNHE01000001_gene596
annotation not available (97 aa)
   
          0.773
JNHE01000002_gene2142
annotation not available (91 aa)
   
          0.745
JNHE01000009_gene3288
annotation not available (145 aa)
   
          0.702
JNHE01000002_gene2305
annotation not available (124 aa)
   
          0.685
JNHE01000008_gene3755
annotation not available (65 aa)
   
          0.678
JNHE01000035_gene4250
annotation not available (99 aa)
   
          0.667
JNHE01000002_gene2091
annotation not available (88 aa)
   
          0.655
JNHE01000001_gene543
annotation not available (266 aa)
   
          0.621
JNHE01000029_gene752
annotation not available (286 aa)
   
          0.603
JNHE01000003_gene1793
annotation not available (91 aa)
   
          0.597
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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