STRINGSTRING
JNHE01000006_gene1139 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000006_gene1139" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000006_gene1139annotation not available (121 aa)    
Predicted Functional Partners:
JNHE01000017_gene4611
annotation not available (105 aa)
 
   
  0.948
JNHE01000006_gene1172
annotation not available (144 aa)
   
        0.759
JNHE01000017_gene4601
annotation not available (198 aa)
     
        0.747
JNHE01000026_gene3098
annotation not available (640 aa)
     
        0.743
JNHE01000001_gene566
annotation not available (156 aa)
     
        0.685
JNHE01000013_gene2788
annotation not available (331 aa)
     
        0.629
JNHE01000036_gene4348
annotation not available (158 aa)
   
          0.593
JNHE01000017_gene4612
annotation not available (123 aa)
   
   
  0.592
JNHE01000006_gene1120
annotation not available (795 aa)
 
          0.588
JNHE01000028_gene802
annotation not available (115 aa)
   
   
  0.554
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (8%) [HD]