STRINGSTRING
gshB protein (Pseudomonas oleovorans) - STRING interaction network
"gshB" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gshBannotation not available (318 aa)    
Predicted Functional Partners:
JNHE01000006_gene1029
annotation not available (1441 aa)
   
 
  0.967
JNHE01000042_gene3203
annotation not available (452 aa)
     
  0.946
gshA
annotation not available (526 aa)
 
   
  0.935
JNHE01000008_gene3745
annotation not available (161 aa)
     
 
  0.860
JNHE01000022_gene2598
annotation not available (200 aa)
       
  0.856
JNHE01000001_gene317
annotation not available (208 aa)
       
  0.856
JNHE01000037_gene4285
annotation not available (885 aa)
     
 
  0.846
pepA
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides; Belongs to the peptidase M17 family (495 aa)
   
 
    0.839
JNHE01000016_gene4478
annotation not available (257 aa)
   
      0.812
JNHE01000009_gene3309
annotation not available (161 aa)
     
 
  0.801
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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