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JNHE01000006_gene1164 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000006_gene1164" - Putative pre-16S rRNA nuclease in Pseudomonas oleovorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000006_gene1164Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (144 aa)    
Predicted Functional Partners:
JNHE01000006_gene1163
annotation not available (189 aa)
   
   
  0.974
JNHE01000006_gene1151
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (241 aa)
        0.823
gshB
annotation not available (318 aa)
          0.788
JNHE01000006_gene1162
annotation not available (298 aa)
   
        0.724
JNHE01000006_gene1167
annotation not available (423 aa)
   
        0.720
JNHE01000006_gene1165
annotation not available (167 aa)
              0.720
pyrB
annotation not available (335 aa)
              0.713
JNHE01000055_gene1778
annotation not available (287 aa)
 
        0.661
JNHE01000025_gene2841
annotation not available (142 aa)
   
 
 
  0.642
JNHE01000017_gene4616
annotation not available (443 aa)
   
        0.623
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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