STRINGSTRING
JNHE01000006_gene1178 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000006_gene1178" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000006_gene1178annotation not available (354 aa)    
Predicted Functional Partners:
JNHE01000006_gene1177
annotation not available (255 aa)
 
        0.963
JNHE01000034_gene4180
annotation not available (187 aa)
   
          0.693
JNHE01000029_gene722
annotation not available (432 aa)
   
          0.682
JNHE01000010_gene3404
annotation not available (113 aa)
   
          0.678
JNHE01000004_gene1668
annotation not available (226 aa)
   
          0.674
JNHE01000010_gene3411
annotation not available (261 aa)
   
          0.669
JNHE01000010_gene3420
annotation not available (148 aa)
   
          0.664
JNHE01000049_gene1482
annotation not available (342 aa)
   
          0.662
JNHE01000002_gene2167
annotation not available (383 aa)
   
          0.662
JNHE01000010_gene3418
annotation not available (141 aa)
   
          0.656
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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