STRINGSTRING
rimK protein (Pseudomonas oleovorans) - STRING interaction network
"rimK" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimKannotation not available (301 aa)    
Predicted Functional Partners:
JNHE01000006_gene1197
annotation not available (156 aa)
          0.997
JNHE01000006_gene1029
annotation not available (1441 aa)
   
 
  0.967
JNHE01000006_gene1199
annotation not available (298 aa)
              0.863
gshA
annotation not available (526 aa)
       
  0.772
JNHE01000001_gene438
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family (1311 aa)
       
  0.762
JNHE01000038_gene17
annotation not available (170 aa)
 
          0.759
JNHE01000040_gene83
annotation not available (556 aa)
         
  0.757
JNHE01000002_gene2164
annotation not available (157 aa)
 
          0.710
JNHE01000020_gene4008
annotation not available (474 aa)
     
 
    0.700
purK
N5-carboxyaminoimidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) (361 aa)
       
  0.663
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (8%) [HD]