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JNHE01000006_gene1211 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000006_gene1211" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000006_gene1211annotation not available (454 aa)    
Predicted Functional Partners:
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (359 aa)
     
    0.739
JNHE01000025_gene2855
annotation not available (515 aa)
   
   
    0.722
JNHE01000006_gene1210
annotation not available (225 aa)
              0.699
JNHE01000003_gene1793
annotation not available (91 aa)
   
          0.668
JNHE01000023_gene2548
annotation not available (143 aa)
   
          0.659
JNHE01000005_gene997
annotation not available (341 aa)
   
        0.647
JNHE01000001_gene469
annotation not available (400 aa)
   
 
 
  0.628
JNHE01000018_gene3933
annotation not available (143 aa)
   
          0.604
JNHE01000008_gene3751
annotation not available (88 aa)
   
          0.604
JNHE01000007_gene1266
annotation not available (83 aa)
   
          0.595
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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