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JNHE01000007_gene1296 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000007_gene1296" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000007_gene1296annotation not available (246 aa)    
Predicted Functional Partners:
JNHE01000007_gene1297
annotation not available (269 aa)
 
  0.999
JNHE01000025_gene2847
annotation not available (334 aa)
 
 
  0.973
JNHE01000020_gene3946
annotation not available (313 aa)
   
 
  0.947
JNHE01000007_gene1294
annotation not available (747 aa)
 
   
  0.938
fliA
RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes (240 aa)
   
  0.918
JNHE01000007_gene1282
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (159 aa)
 
   
  0.902
cheB
Chemotaxis response regulator protein-glutamate methylesterase; Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR (373 aa)
 
   
  0.898
JNHE01000007_gene1247
annotation not available (681 aa)
 
   
  0.880
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin (378 aa)
 
   
  0.876
JNHE01000007_gene1286
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis (258 aa)
 
 
  0.874
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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