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JNHE01000008_gene3727 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000008_gene3727" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000008_gene3727annotation not available (309 aa)    
Predicted Functional Partners:
JNHE01000008_gene3726
annotation not available (491 aa)
 
  0.988
JNHE01000048_gene1516
annotation not available (517 aa)
 
  0.887
JNHE01000002_gene2172
annotation not available (907 aa)
   
 
 
  0.761
JNHE01000002_gene2173
annotation not available (845 aa)
   
 
 
  0.752
JNHE01000009_gene3324
annotation not available (876 aa)
   
 
 
  0.747
JNHE01000016_gene4486
annotation not available (264 aa)
         
  0.740
JNHE01000002_gene2313
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (507 aa)
       
    0.727
JNHE01000001_gene463
annotation not available (870 aa)
       
 
  0.709
JNHE01000039_gene47
annotation not available (117 aa)
       
 
  0.699
JNHE01000050_gene2716
annotation not available (580 aa)
       
    0.699
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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