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JNHE01000009_gene3287 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000009_gene3287" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000009_gene3287annotation not available (82 aa)    
Predicted Functional Partners:
JNHE01000009_gene3286
annotation not available (207 aa)
 
   
  0.780
rpsP
annotation not available (83 aa)
     
   
  0.755
JNHE01000021_gene4052
annotation not available (265 aa)
     
        0.707
JNHE01000002_gene2156
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family (762 aa)
   
        0.697
nusG
Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination (170 aa)
   
        0.638
JNHE01000021_gene4048
annotation not available (351 aa)
   
      0.605
tusA
Sulfur carrier protein TusA; Sulfur carrier protein which probably makes part of a sulfur-relay system (83 aa)
   
     
  0.599
trmJ
tRNA (cytidine/uridine-2’-O-)-methyltransferase TrmJ; Catalyzes the formation of 2’O-methylated cytidine (Cm32) or 2’O-methylated uridine (Um32) at position 32 in tRNA (232 aa)
   
        0.564
JNHE01000001_gene285
annotation not available (205 aa)
 
        0.550
ftsH
ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family (637 aa)
   
        0.540
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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