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JNHE01000009_gene3334 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000009_gene3334" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000009_gene3334annotation not available (273 aa)    
Predicted Functional Partners:
JNHE01000003_gene1898
annotation not available (642 aa)
   
        0.790
JNHE01000023_gene2550
annotation not available (333 aa)
     
        0.721
JNHE01000001_gene261
annotation not available (210 aa)
     
        0.721
JNHE01000009_gene3317
annotation not available (222 aa)
   
        0.713
JNHE01000001_gene260
annotation not available (156 aa)
     
        0.708
JNHE01000009_gene3316
annotation not available (205 aa)
   
        0.703
JNHE01000021_gene4063
annotation not available (186 aa)
   
        0.697
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; Belongs to the universal ribosomal protein uS5 family (166 aa)
       
      0.687
JNHE01000049_gene1485
annotation not available (363 aa)
   
        0.685
argA
annotation not available (432 aa)
   
        0.631
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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