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JNHE01000009_gene3359 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000009_gene3359" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000009_gene3359annotation not available (188 aa)    
Predicted Functional Partners:
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (306 aa)
   
        0.761
JNHE01000032_gene922
annotation not available (620 aa)
     
        0.755
JNHE01000018_gene3879
annotation not available (845 aa)
     
        0.755
JNHE01000010_gene3534
annotation not available (690 aa)
     
        0.753
JNHE01000009_gene3358
annotation not available (133 aa)
              0.676
JNHE01000014_gene2932
annotation not available (299 aa)
   
        0.489
JNHE01000047_gene1534
annotation not available (265 aa)
   
        0.462
JNHE01000009_gene3360
annotation not available (503 aa)
              0.444
JNHE01000009_gene3357
annotation not available (70 aa)
              0.440
JNHE01000015_gene4463
annotation not available (554 aa)
   
        0.424
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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