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JNHE01000009_gene3393 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000009_gene3393" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000009_gene3393annotation not available (164 aa)    
Predicted Functional Partners:
JNHE01000009_gene3392
annotation not available (124 aa)
              0.845
JNHE01000009_gene3394
annotation not available (508 aa)
              0.767
JNHE01000020_gene3985
annotation not available (196 aa)
 
          0.744
JNHE01000009_gene3395
annotation not available (700 aa)
   
        0.743
JNHE01000009_gene3391
annotation not available (694 aa)
              0.738
JNHE01000009_gene3396
annotation not available (127 aa)
              0.459
JNHE01000009_gene3390
annotation not available (300 aa)
              0.435
JNHE01000004_gene1734
HTH-type transcriptional regulator IscR; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins (165 aa)
     
      0.421
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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