STRINGSTRING
JNHE01000009_gene3400 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000009_gene3400" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000009_gene3400annotation not available (63 aa)    
Predicted Functional Partners:
JNHE01000021_gene4059
annotation not available (126 aa)
   
          0.680
JNHE01000024_gene2464
annotation not available (62 aa)
   
          0.676
JNHE01000036_gene4316
annotation not available (63 aa)
   
          0.646
JNHE01000001_gene162
annotation not available (81 aa)
   
          0.638
JNHE01000034_gene4194
annotation not available (83 aa)
   
          0.630
JNHE01000009_gene3398
annotation not available (107 aa)
 
          0.623
JNHE01000002_gene2193
annotation not available (102 aa)
   
          0.585
JNHE01000002_gene2090
annotation not available (401 aa)
   
          0.582
JNHE01000057_gene105
annotation not available (154 aa)
   
          0.572
JNHE01000002_gene2182
annotation not available (127 aa)
   
          0.549
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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