STRINGSTRING
JNHE01000010_gene3475 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000010_gene3475" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000010_gene3475annotation not available (463 aa)    
Predicted Functional Partners:
JNHE01000010_gene3476
annotation not available (224 aa)
  0.998
JNHE01000020_gene3970
annotation not available (1161 aa)
     
0.953
JNHE01000003_gene2012
annotation not available (230 aa)
 
    0.849
JNHE01000012_gene1426
annotation not available (227 aa)
 
 
    0.849
JNHE01000002_gene2329
annotation not available (218 aa)
 
    0.848
JNHE01000002_gene2415
annotation not available (222 aa)
 
  0.847
JNHE01000038_gene20
annotation not available (226 aa)
  0.832
JNHE01000017_gene4593
annotation not available (225 aa)
 
  0.830
JNHE01000011_gene3665
annotation not available (226 aa)
 
 
    0.822
JNHE01000018_gene3930
annotation not available (230 aa)
 
 
    0.822
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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