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JNHE01000010_gene3482 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000010_gene3482" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000010_gene3482annotation not available (429 aa)    
Predicted Functional Partners:
JNHE01000010_gene3481
annotation not available (271 aa)
 
        0.722
JNHE01000004_gene1649
annotation not available (479 aa)
     
  0.660
JNHE01000010_gene3480
annotation not available (260 aa)
 
     
  0.594
JNHE01000014_gene2966
DNA-binding protein Fis; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters (92 aa)
   
        0.471
dusB
tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family (313 aa)
   
        0.471
JNHE01000016_gene4554
annotation not available (450 aa)
   
  0.456
JNHE01000016_gene4474
annotation not available (736 aa)
 
 
  0.433
JNHE01000011_gene3583
annotation not available (442 aa)
 
 
 
  0.424
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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