STRINGSTRING
JNHE01000010_gene3496 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000010_gene3496" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000010_gene3496annotation not available (59 aa)    
Predicted Functional Partners:
JNHE01000025_gene2856
annotation not available (302 aa)
   
          0.758
JNHE01000010_gene3495
annotation not available (333 aa)
   
   
  0.736
JNHE01000057_gene104
annotation not available (121 aa)
   
          0.713
JNHE01000025_gene2872
annotation not available (227 aa)
   
          0.686
JNHE01000025_gene2855
annotation not available (515 aa)
   
          0.681
JNHE01000054_gene3142
annotation not available (231 aa)
   
          0.670
JNHE01000010_gene3497
annotation not available (193 aa)
 
        0.665
JNHE01000007_gene1314
annotation not available (108 aa)
   
          0.665
JNHE01000014_gene2936
annotation not available (177 aa)
   
          0.659
JNHE01000003_gene1983
annotation not available (53 aa)
   
          0.656
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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