STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000010_gene3534annotation not available (690 aa)    
Predicted Functional Partners:
JNHE01000010_gene3533
annotation not available
 0.999
JNHE01000010_gene3535
annotation not available
 0.999
JNHE01000010_gene3536
annotation not available
 0.998
JNHE01000010_gene3537
annotation not available
  
 0.952
JNHE01000006_gene1212
annotation not available
   
 
  0.809
JNHE01000010_gene3532
annotation not available
       0.802
JNHE01000047_gene1534
annotation not available
   
 
  0.791
JNHE01000032_gene922
annotation not available
   
  
 0.768
JNHE01000018_gene3879
annotation not available
   
    0.755
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
   
    0.754
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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