STRINGSTRING
JNHE01000010_gene3551 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000010_gene3551" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000010_gene3551annotation not available (560 aa)    
Predicted Functional Partners:
JNHE01000010_gene3553
annotation not available (1404 aa)
  0.961
JNHE01000010_gene3552
annotation not available (128 aa)
 
 
    0.959
JNHE01000010_gene3555
annotation not available (766 aa)
 
 
0.880
JNHE01000007_gene1277
annotation not available (562 aa)
 
  0.865
JNHE01000020_gene3970
annotation not available (1161 aa)
     
  0.855
JNHE01000006_gene1003
annotation not available (875 aa)
 
 
0.809
JNHE01000010_gene3554
annotation not available (377 aa)
 
 
  0.805
JNHE01000012_gene1434
annotation not available (606 aa)
 
  0.800
JNHE01000001_gene153
annotation not available (1378 aa)
 
 
0.790
JNHE01000002_gene2274
annotation not available (1466 aa)
 
 
  0.784
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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