STRINGSTRING
JNHE01000010_gene3559 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000010_gene3559" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000010_gene3559annotation not available (106 aa)    
Predicted Functional Partners:
JNHE01000023_gene2566
annotation not available (651 aa)
   
          0.783
JNHE01000018_gene3872
annotation not available (157 aa)
   
          0.744
JNHE01000046_gene3796
annotation not available (165 aa)
   
          0.734
JNHE01000004_gene1751
annotation not available (135 aa)
   
          0.733
JNHE01000021_gene4061
annotation not available (137 aa)
   
          0.732
JNHE01000001_gene125
annotation not available (202 aa)
   
          0.730
JNHE01000022_gene2631
annotation not available (107 aa)
   
          0.727
JNHE01000001_gene558
annotation not available (318 aa)
   
          0.723
JNHE01000025_gene2856
annotation not available (302 aa)
   
          0.716
JNHE01000032_gene908
annotation not available (144 aa)
   
          0.714
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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