STRINGSTRING
JNHE01000011_gene3567 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000011_gene3567" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000011_gene3567annotation not available (582 aa)    
Predicted Functional Partners:
JNHE01000015_gene4438
annotation not available (629 aa)
 
  0.968
JNHE01000006_gene1029
annotation not available (1441 aa)
     
  0.870
JNHE01000011_gene3569
annotation not available (328 aa)
 
   
0.784
tatC
Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides (254 aa)
       
 
  0.783
JNHE01000006_gene1064
annotation not available (113 aa)
       
 
  0.759
JNHE01000020_gene3980
annotation not available (85 aa)
     
  0.748
JNHE01000015_gene4391
annotation not available (134 aa)
     
  0.748
JNHE01000001_gene308
annotation not available (112 aa)
     
  0.748
JNHE01000014_gene2995
annotation not available (810 aa)
     
 
  0.731
tatA
Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system (77 aa)
       
 
  0.713
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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