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JNHE01000011_gene3569 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000011_gene3569" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000011_gene3569annotation not available (328 aa)    
Predicted Functional Partners:
JNHE01000011_gene3567
annotation not available (582 aa)
 
   
0.784
JNHE01000001_gene202
annotation not available (141 aa)
 
     
  0.657
JNHE01000002_gene2380
annotation not available (485 aa)
 
   
  0.647
JNHE01000011_gene3574
annotation not available (150 aa)
 
   
  0.640
JNHE01000022_gene2593
annotation not available (470 aa)
   
   
  0.620
JNHE01000011_gene3568
annotation not available (38 aa)
              0.581
JNHE01000010_gene3475
annotation not available (463 aa)
 
     
  0.537
JNHE01000002_gene2379
annotation not available (403 aa)
 
     
  0.536
JNHE01000004_gene1690
annotation not available (450 aa)
 
   
  0.530
rnd
Ribonuclease D; Exonuclease involved in the 3’ processing of various precursor tRNAs. Initiates hydrolysis at the 3’-terminus of an RNA molecule and releases 5’-mononucleotides; Belongs to the RNase D family (377 aa)
     
   
  0.516
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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