STRINGSTRING
JNHE01000011_gene3581 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000011_gene3581" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000011_gene3581annotation not available (233 aa)    
Predicted Functional Partners:
JNHE01000011_gene3582
annotation not available (204 aa)
   
   
  0.767
JNHE01000007_gene1336
annotation not available (117 aa)
 
   
  0.661
JNHE01000007_gene1334
annotation not available (171 aa)
 
          0.618
JNHE01000007_gene1335
annotation not available (308 aa)
 
          0.585
JNHE01000007_gene1332
annotation not available (414 aa)
 
          0.562
JNHE01000011_gene3580
annotation not available (151 aa)
              0.527
JNHE01000011_gene3583
annotation not available (442 aa)
   
      0.484
JNHE01000007_gene1340
annotation not available (281 aa)
 
          0.434
JNHE01000007_gene1342
annotation not available (484 aa)
 
          0.432
JNHE01000007_gene1341
annotation not available (798 aa)
 
          0.432
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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