STRINGSTRING
JNHE01000011_gene3608 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000011_gene3608" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000011_gene3608annotation not available (194 aa)    
Predicted Functional Partners:
JNHE01000011_gene3607
annotation not available (238 aa)
   
        0.732
JNHE01000011_gene3606
annotation not available (119 aa)
              0.708
JNHE01000036_gene4302
annotation not available (205 aa)
 
          0.534
JNHE01000011_gene3605
annotation not available (151 aa)
 
          0.516
JNHE01000001_gene415
annotation not available (316 aa)
         
  0.515
JNHE01000002_gene2302
annotation not available (267 aa)
 
   
    0.433
JNHE01000001_gene400
annotation not available (545 aa)
   
 
    0.426
JNHE01000004_gene1732
Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (128 aa)
     
      0.419
JNHE01000001_gene404
annotation not available (254 aa)
     
  0.406
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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