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JNHE01000011_gene3669 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000011_gene3669" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000011_gene3669annotation not available (339 aa)    
Predicted Functional Partners:
JNHE01000011_gene3670
annotation not available (304 aa)
 
          0.946
JNHE01000011_gene3672
annotation not available (824 aa)
 
     
  0.841
JNHE01000011_gene3673
annotation not available (636 aa)
 
          0.817
JNHE01000011_gene3671
annotation not available (466 aa)
 
        0.709
JNHE01000011_gene3676
annotation not available (265 aa)
 
        0.706
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (333 aa)
       
 
  0.701
JNHE01000001_gene176
annotation not available (575 aa)
       
      0.668
JNHE01000007_gene1303
annotation not available (113 aa)
     
        0.455
JNHE01000001_gene129
annotation not available (330 aa)
   
          0.444
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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