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JNHE01000012_gene1424 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000012_gene1424" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000012_gene1424annotation not available (229 aa)    
Predicted Functional Partners:
JNHE01000012_gene1423
annotation not available (234 aa)
   
  0.970
JNHE01000012_gene1425
annotation not available (422 aa)
 
      0.898
JNHE01000012_gene1422
annotation not available (128 aa)
         
  0.875
JNHE01000009_gene3356
annotation not available (188 aa)
   
  0.828
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (468 aa)
   
  0.803
JNHE01000021_gene4032
annotation not available (356 aa)
     
  0.795
JNHE01000007_gene1258
annotation not available (372 aa)
     
  0.795
JNHE01000025_gene2886
annotation not available (244 aa)
 
 
    0.793
JNHE01000013_gene2791
16S rRNA m(5)C-967 methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (437 aa)
   
  0.783
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (206 aa)
     
    0.767
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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