STRINGSTRING
JNHE01000012_gene1430 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000012_gene1430" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000012_gene1430annotation not available (116 aa)    
Predicted Functional Partners:
JNHE01000012_gene1428
annotation not available (241 aa)
 
          0.851
JNHE01000012_gene1429
annotation not available (210 aa)
              0.845
JNHE01000025_gene2880
annotation not available (249 aa)
   
          0.723
JNHE01000002_gene2272
annotation not available (57 aa)
   
          0.701
JNHE01000013_gene2757
annotation not available (153 aa)
   
          0.685
JNHE01000012_gene1427
annotation not available (652 aa)
              0.657
JNHE01000012_gene1424
annotation not available (229 aa)
 
          0.648
JNHE01000001_gene500
annotation not available (100 aa)
   
          0.638
JNHE01000046_gene3791
annotation not available (287 aa)
   
          0.601
JNHE01000012_gene1431
annotation not available (541 aa)
 
          0.583
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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