STRINGSTRING
JNHE01000013_gene2779 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000013_gene2779" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000013_gene2779annotation not available (502 aa)    
Predicted Functional Partners:
JNHE01000002_gene2209
annotation not available (476 aa)
   
 
  0.789
JNHE01000013_gene2780
annotation not available (306 aa)
 
        0.782
JNHE01000013_gene2778
annotation not available (306 aa)
 
   
  0.725
JNHE01000010_gene3521
annotation not available (528 aa)
       
  0.629
betA
Oxygen-dependent choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate (568 aa)
       
  0.629
JNHE01000004_gene1643
annotation not available (1074 aa)
       
  0.629
JNHE01000013_gene2781
annotation not available (523 aa)
   
   
  0.610
JNHE01000006_gene1105
annotation not available (473 aa)
     
 
    0.602
JNHE01000009_gene3332
annotation not available (194 aa)
   
        0.576
JNHE01000046_gene3797
annotation not available (336 aa)
     
  0.519
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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