STRINGSTRING
JNHE01000013_gene2797 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000013_gene2797" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000013_gene2797annotation not available (123 aa)    
Predicted Functional Partners:
JNHE01000025_gene2840
annotation not available (458 aa)
 
 
  0.909
JNHE01000011_gene3625
annotation not available (418 aa)
       
  0.787
JNHE01000001_gene314
annotation not available (306 aa)
 
  0.726
nagZ
Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides; Belongs to the glycosyl hydrolase 3 family. NagZ subfamily (326 aa)
 
   
    0.695
JNHE01000001_gene169
annotation not available (152 aa)
       
  0.682
JNHE01000016_gene4479
annotation not available (504 aa)
 
  0.658
mpl
UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate; Belongs to the MurCDEF family. Mpl subfamily (450 aa)
     
 
    0.627
JNHE01000013_gene2796
annotation not available (216 aa)
              0.564
JNHE01000007_gene1246
annotation not available (400 aa)
       
  0.512
JNHE01000006_gene1199
annotation not available (298 aa)
 
   
  0.511
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (23%) [HD]