STRINGSTRING
JNHE01000014_gene2987 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000014_gene2987" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000014_gene2987annotation not available (1606 aa)    
Predicted Functional Partners:
JNHE01000014_gene2989
annotation not available (773 aa)
 
  0.960
JNHE01000014_gene2909
annotation not available (1663 aa)
     
  0.876
JNHE01000021_gene4088
annotation not available (1167 aa)
   
 
  0.757
nrdR
Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes (154 aa)
     
      0.725
JNHE01000014_gene2988
annotation not available (114 aa)
              0.544
JNHE01000006_gene1120
annotation not available (795 aa)
   
        0.520
JNHE01000014_gene2986
annotation not available (459 aa)
              0.501
JNHE01000014_gene2985
annotation not available (342 aa)
   
   
  0.494
JNHE01000006_gene1121
annotation not available (162 aa)
   
        0.487
JNHE01000014_gene2984
annotation not available (153 aa)
              0.459
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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