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JNHE01000015_gene4399 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000015_gene4399" - annotation not available in Pseudomonas oleovorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000015_gene4399annotation not available (497 aa)    
Predicted Functional Partners:
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (168 aa)
          0.836
JNHE01000001_gene289
annotation not available (119 aa)
 
        0.807
JNHE01000030_gene616
annotation not available (262 aa)
 
        0.787
JNHE01000013_gene2787
annotation not available (371 aa)
   
  0.770
JNHE01000035_gene4257
annotation not available (246 aa)
 
   
  0.757
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group (174 aa)
 
     
  0.692
JNHE01000015_gene4400
annotation not available (86 aa)
              0.688
JNHE01000001_gene403
annotation not available (277 aa)
       
    0.629
lpxB
Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (354 aa)
       
    0.613
JNHE01000010_gene3531
annotation not available (444 aa)
       
    0.610
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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