STRINGSTRING
JNHE01000015_gene4403 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000015_gene4403" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000015_gene4403annotation not available (141 aa)    
Predicted Functional Partners:
JNHE01000032_gene915
annotation not available (317 aa)
       
    0.745
JNHE01000009_gene3311
annotation not available (394 aa)
 
 
        0.725
JNHE01000015_gene4402
annotation not available (409 aa)
 
          0.696
JNHE01000015_gene4404
annotation not available (108 aa)
              0.677
JNHE01000012_gene1378
annotation not available (403 aa)
       
  0.613
JNHE01000025_gene2842
annotation not available (482 aa)
 
      0.584
iscS
Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily (382 aa)
       
    0.573
JNHE01000002_gene2080
annotation not available (117 aa)
   
   
  0.524
JNHE01000010_gene3525
annotation not available (120 aa)
     
        0.420
JNHE01000009_gene3254
annotation not available (105 aa)
     
        0.420
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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