STRINGSTRING
JNHE01000015_gene4453 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000015_gene4453" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000015_gene4453annotation not available (167 aa)    
Predicted Functional Partners:
JNHE01000047_gene1530
annotation not available (280 aa)
 
   
    0.908
JNHE01000015_gene4455
annotation not available (215 aa)
              0.868
JNHE01000015_gene4456
annotation not available (221 aa)
              0.868
JNHE01000015_gene4454
annotation not available (243 aa)
              0.851
JNHE01000029_gene727
annotation not available (1215 aa)
         
  0.840
JNHE01000015_gene4457
annotation not available (261 aa)
              0.825
ureA
annotation not available (100 aa)
       
  0.813
JNHE01000007_gene1323
annotation not available (578 aa)
 
 
    0.812
ureC
annotation not available (566 aa)
   
 
    0.776
JNHE01000007_gene1332
annotation not available (414 aa)
 
        0.774
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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