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JNHE01000015_gene4458 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000015_gene4458" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000015_gene4458annotation not available (234 aa)    
Predicted Functional Partners:
JNHE01000015_gene4457
annotation not available (261 aa)
 
          0.642
JNHE01000015_gene4459
annotation not available (108 aa)
              0.623
JNHE01000015_gene4456
annotation not available (221 aa)
 
          0.621
JNHE01000002_gene2156
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family (762 aa)
     
    0.610
JNHE01000015_gene4455
annotation not available (215 aa)
 
          0.609
JNHE01000015_gene4454
annotation not available (243 aa)
              0.556
JNHE01000015_gene4453
annotation not available (167 aa)
              0.417
JNHE01000025_gene2894
Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (881 aa)
   
    0.416
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho’s RNA-dependent ATPase activity, and release of the mRNA from the DNA template (419 aa)
              0.416
JNHE01000007_gene1338
annotation not available (255 aa)
   
   
  0.413
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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